Transcript: GMDS-DT:75

Basic information

LNCipedia transcript ID: GMDS-DT:75 
LNCipedia gene ID: GMDS-DT
Location (hg38): chr6:2245762-2283582
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 409 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011637; NONHSAT106621
Alternative gene names: XLOC_005126; linc-WRNIP1-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.9077 non-coding 
CPAT coding probability 1.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GMDS-DT:75 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WRNIP1-2:2
3.1 lnc-WRNIP1-2:2
4.0 GMDS-AS1:4
4.1 GMDS-AS1:4
5.0 GMDS-AS1:4
5.1 GMDS-DT:5
5.2 GMDS-DT:75