Transcript: GMDS-DT:77

Basic information

LNCipedia transcript ID: GMDS-DT:77 
LNCipedia gene ID: GMDS-DT
Location (hg38): chr6:2245762-2283774
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2323 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000250903.4|ENST00000456943.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.583 non-coding 
CPAT coding probability 2.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GMDS-DT:77 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 GMDS-AS1:51
5.0 GMDS-AS1:51
5.1 GMDS-DT:7
5.2 GMDS-DT:77