Transcript: GMDS-DT:80

Basic information

LNCipedia transcript ID: GMDS-DT:80 
LNCipedia gene ID: GMDS-DT
Location (hg38): chr6:2245762-2352338
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 16716 bp
Exons: 8
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000250903.4|MICT00000295888.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.0782 non-coding 
CPAT coding probability 47.12% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
GMDS-DT:80 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 GMDS-AS1:50
5.0 GMDS-AS1:50
5.1 GMDS-DT:10
5.2 GMDS-DT:80