Transcript: GPC5-AS1:4

Basic information

LNCipedia transcript ID: GPC5-AS1:4 
LNCipedia gene ID: GPC5-AS1
RefSeq ID: NR_049776
Location (hg38): chr13:92701389-92719955
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 491 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT034706; NR_049776; NR_049776.1
Alternative gene names: ; GPC5-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -48.8176 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GPC5-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DCT-4:4
4.0 GPC5-AS1:4
4.1 GPC5-AS1:4
5.0 GPC5-AS1:4
5.1 GPC5-AS1:4
5.2 GPC5-AS1:4