Transcript: GPR50-AS1:2

Basic information

LNCipedia transcript ID: GPR50-AS1:2 
LNCipedia gene ID: GPR50-AS1
RefSeq ID: NR_135300
Location (hg38): chrX:151175198-151177836
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1614 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135300.1
Alternative gene names: GPR50-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -124.2969 non-coding 
CPAT coding probability 15.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GPR50-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 GPR50-AS1:2
5.1 GPR50-AS1:2
5.2 GPR50-AS1:2