Transcript: GRID1-AS1:3

Basic information

LNCipedia transcript ID: GRID1-AS1:3 
LNCipedia gene ID: GRID1-AS1
Ensembl Gene ID: ENSG00000234942
Ensembl Transcript ID: ENST00000628016
Location (hg38): chr10:85577753-85605804
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 556 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000628016.1
Alternative gene names: ENSG00000234942.2; GRID1-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -166.4689 non-coding 
CPAT coding probability 2.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GRID1-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 GRID1-AS1:3
4.1 GRID1-AS1:3
5.0 GRID1-AS1:3
5.1 GRID1-AS1:3
5.2 GRID1-AS1:3