Transcript: GRID1-AS1:7

Basic information

LNCipedia transcript ID: GRID1-AS1:7 
LNCipedia gene ID: GRID1-AS1
Location (hg38): chr10:85605393-85606506
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 430 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000443311.1; RP11-93H12.2-001; OTTHUMT00000049145.1; NONHSAT015355
Alternative gene names: ENSG00000234942.1; RP11-93H12.2; OTTHUMG00000018648.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -386.4389 non-coding 
CPAT coding probability 1.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GRID1-AS1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OPN4-3:1
4.0 GRID1-AS1:7
4.1 GRID1-AS1:7
5.0 GRID1-AS1:7
5.1 GRID1-AS1:7
5.2 GRID1-AS1:7