Transcript: GRTP1-AS1:6

Basic information

LNCipedia transcript ID: GRTP1-AS1:6 
HGNC Gene Symbol: GRTP1-AS1    
HGNC Full Gene Name: GRTP1 antisense RNA 1
Ensembl Gene ID: ENSG00000225083
Ensembl Transcript ID: ENST00000423246
Location (hg38): chr13:113351816-113361868
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 465 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000423246.1; GRTP1-AS1-001; OTTHUMT00000045884.1; NONHSAT035343
Alternative gene names: ENSG00000225083.1; GRTP1-AS1; OTTHUMG00000017382.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -108.1941 non-coding 
CPAT coding probability 28.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GRTP1-AS1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LAMP1-1:2
4.0 GRTP1-AS1:6
4.1 GRTP1-AS1:6
5.0 GRTP1-AS1:6
5.1 GRTP1-AS1:6
5.2 GRTP1-AS1:6