Transcript: H1FX-AS1:6

Basic information

LNCipedia transcript ID: H1FX-AS1:6 
LNCipedia gene ID: H1FX-AS1
Location (hg38): chr3:129317062-129323372
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 781 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT147251
Alternative gene names: FLJ34151


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.5435 non-coding 
CPAT coding probability 3.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
H1FX-AS1:6 no no no no

Available literature

  1. Ota (2004), Complete sequencing and characterization of 21,243 full-length human cDNAs., Nat. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C3orf37-1:9
4.0 H1FX-AS1:6
4.1 H1FX-AS1:6
5.0 H1FX-AS1:6
5.1 H1FX-AS1:6
5.2 H1FX-AS1:6