Transcript: HAGLROS:6

Basic information

LNCipedia transcript ID: HAGLROS:6 
LNCipedia gene ID: HAGLROS
Location (hg38): chr2:176178180-176179146
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 967 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT075649; FPKM1_group_17697_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -415.7932 non-coding 
CPAT coding probability 0.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HAGLROS:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HOXD3-1:6
4.0 HAGLROS:6
4.1 HAGLROS:6
5.0 HAGLROS:6
5.1 HAGLROS:6
5.2 HAGLROS:6