Transcript: HCCAT5:2
Basic information
LNCipedia transcript ID: HCCAT5:2
HGNC Gene Symbol: HCCAT5
HGNC Full Gene Name:
hepatocellular carcinoma associated transcript 5
Ensembl Gene ID:
ENSG00000260880
Ensembl Transcript ID:
ENST00000569990
RefSeq ID:
NR_027756
Location (hg38): chr16:73092349-73093774
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1079 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000569990.2; RP11-346C20.2-001; OTTHUMT00000440524.1; NONHSAT143629; NR_027756.1
Alternative gene names: ENSG00000260880.2; RP11-346C20.2; OTTHUMG00000172964.2; HCCAT5; HTA; FJ222407; ENSG00000260880.3
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Available literature
- Liu (2013), Molecular clone and functional study of a novel hepatoma associated gene., Int. J. Oncol.
- Liu (2010), Identification of HTA as a novel-specific marker for human hepatocellular carcinoma., J. Cancer Res. Clin. Oncol.
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 3.1 | lnc-RP11-44L9.1.1-10:1 |
| 4.0 | HCCAT5:2 |
| 4.1 | HCCAT5:2 |
| 5.0 | HCCAT5:2 |
| 5.1 | HCCAT5:2 |
| 5.2 | HCCAT5:2 |