Transcript: HCG24:2

Basic information

LNCipedia transcript ID: HCG24:2 
LNCipedia gene ID: HCG24
Location (hg38): chr6:33144617-33148063
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1291 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT108971; FPKM1_group_27472_transcript_3
Alternative gene names: dJ1033B10.15


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.5848 non-coding 
CPAT coding probability 26.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HCG24:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC39A7-2:3
4.0 HCG24:2
4.1 HCG24:2
5.0 HCG24:2
5.1 HCG24:2
5.2 HCG24:2