Transcript: HDAC2-AS2:116

Basic information

LNCipedia transcript ID: HDAC2-AS2:116 
LNCipedia gene ID: HDAC2-AS2
Location (hg38): chr6:114342250-114371686
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 235 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT114608
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -131.8043 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HDAC2-AS2:116 yes no no no

Available literature

  1. Long (2016), Distinct expression profiles of lncRNAs between early-onset preeclampsia and preterm controls., Clin. Chim. Acta


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MARCKS-5:25
4.0 lnc-MARCKS-5:25
4.1 lnc-MARCKS-5:25
5.0 lnc-MARCKS-5:25
5.1 HDAC2-AS2:54
5.2 HDAC2-AS2:116