Transcript: HDAC2-AS2:124

Basic information

LNCipedia transcript ID: HDAC2-AS2:124 
LNCipedia gene ID: HDAC2-AS2
Location (hg38): chr6:114448916-114456689
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 949 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT114614; FPKM1_group_28237_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -98.607 non-coding 
CPAT coding probability 3.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HDAC2-AS2:124 no no no no

Available literature

  1. Long (2016), Distinct expression profiles of lncRNAs between early-onset preeclampsia and preterm controls., Clin. Chim. Acta


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MARCKS-5:26
4.0 lnc-MARCKS-5:26
4.1 lnc-MARCKS-5:26
5.0 lnc-MARCKS-5:26
5.1 HDAC2-AS2:62
5.2 HDAC2-AS2:124