Transcript: HEXA-AS1:1

Basic information

LNCipedia transcript ID: HEXA-AS1:1 
HGNC Gene Symbol: HEXA-AS1    
HGNC Full Gene Name: HEXA antisense RNA 1
Ensembl Gene ID: ENSG00000260339
Ensembl Transcript ID: ENST00000567598
RefSeq ID: NR_027262
Location (hg38): chr15:72376113-72378788
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2676 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000567598.1; HEXA-AS1-001; OTTHUMT00000435755.1; NONHSAT047087; NR_027262; NR_027262.1
Alternative gene names: ENSG00000260339.1; HEXA-AS1; OTTHUMG00000177184.1; FLJ13315


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.0009 non-coding 
CPAT coding probability 16.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HEXA-AS1:1 yes no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM202-1:1
4.0 HEXA-AS1:1
4.1 HEXA-AS1:1
5.0 HEXA-AS1:1
5.1 HEXA-AS1:1
5.2 HEXA-AS1:1