Transcript: HEXA-AS1:2

Basic information

LNCipedia transcript ID: HEXA-AS1:2 
LNCipedia gene ID: HEXA-AS1
Location (hg38): chr15:72376118-72378788
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2671 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260339.1|ENST00000567598.1
Alternative gene names: FLJ13315


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.0009 non-coding 
CPAT coding probability 8.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HEXA-AS1:2 yes no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 HEXA-AS1:2
5.0 HEXA-AS1:2
5.1 HEXA-AS1:2
5.2 HEXA-AS1:2