Transcript: HID1-AS1:1

Basic information

LNCipedia transcript ID: HID1-AS1:1 
LNCipedia gene ID: HID1-AS1
RefSeq ID: NR_110878
Location (hg38): chr17:74970689-74975728
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 830 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110878; NR_110878.1
Alternative gene names: ; HID1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.7709 non-coding 
CPAT coding probability 2.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HID1-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDR2L-1:3
4.0 HID1-AS1:1
4.1 HID1-AS1:1
5.0 HID1-AS1:1
5.1 HID1-AS1:1
5.2 HID1-AS1:1