Transcript: HID1-AS1:2

Basic information

LNCipedia transcript ID: HID1-AS1:2 
HGNC Gene Symbol: HID1-AS1    
HGNC Full Gene Name: HID1 antisense RNA 1
Ensembl Gene ID: ENSG00000263586
Ensembl Transcript ID: ENST00000577295
Location (hg38): chr17:74970704-74975728
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 815 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000577295.1; RP11-309N17.4-001; OTTHUMT00000445313.1; NONHSAT055831
Alternative gene names: ENSG00000263586.1; RP11-309N17.4; OTTHUMG00000179217.1; HID1-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.7709 non-coding 
CPAT coding probability 2.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HID1-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDR2L-1:1
4.0 HID1-AS1:2
4.1 HID1-AS1:2
5.0 HID1-AS1:2
5.1 HID1-AS1:2
5.2 HID1-AS1:2