Transcript: HLA-F-AS1:6

Basic information

LNCipedia transcript ID: HLA-F-AS1:6 
LNCipedia gene ID: HLA-F-AS1
Location (hg38): chr6:29741582-29744978
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 303 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1188:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -124.924 non-coding 
CPAT coding probability 0.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HLA-F-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 HLA-F-AS1:6
4.1 HLA-F-AS1:6
5.0 HLA-F-AS1:6
5.1 HLA-F-AS1:6
5.2 HLA-F-AS1:6