Transcript: HOMER3-AS1:3

Basic information

LNCipedia transcript ID: HOMER3-AS1:3 
LNCipedia gene ID: HOMER3-AS1
RefSeq ID: NR_134912
Location (hg38): chr19:18940254-18946831
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1029 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134912.1
Alternative gene names: LOC102724360


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.9468 non-coding 
CPAT coding probability 73.97% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
HOMER3-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 HOMER3-AS1:3
5.1 HOMER3-AS1:3
5.2 HOMER3-AS1:3