Transcript: HOMER3-AS1:7

Basic information

LNCipedia transcript ID: HOMER3-AS1:7 
LNCipedia gene ID: HOMER3-AS1
Location (hg38): chr19:18940315-18944038
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1182 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000269019.1|MICT00000170791.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -61.7284 non-coding 
CPAT coding probability 37.95% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
HOMER3-AS1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DDX49-2:2
5.0 lnc-DDX49-2:2
5.1 HOMER3-AS1:4
5.2 HOMER3-AS1:7