Transcript: HOMER3-AS1:8

Basic information

LNCipedia transcript ID: HOMER3-AS1:8 
LNCipedia gene ID: HOMER3-AS1
Location (hg38): chr19:18940315-18946831
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 964 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000269019.1|ENST00000601106.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.9468 non-coding 
CPAT coding probability 51.45% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
HOMER3-AS1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DDX49-2:3
5.0 lnc-DDX49-2:3
5.1 HOMER3-AS1:5
5.2 HOMER3-AS1:8