Transcript: HOXB-AS3:21
Basic information
LNCipedia transcript ID: HOXB-AS3:21
HGNC Gene Symbol: HOXB-AS3
HGNC Full Gene Name:
HOXB cluster antisense RNA 3
Ensembl Gene ID:
ENSG00000233101
Ensembl Transcript ID:
ENST00000465846
Location (hg38): chr17:48549630-48602332
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 434 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT054408; ENST00000465846.2; ENST00000465846.6
Alternative gene names: ENSG00000233101.6; HOXB-AS3; ENSG00000233101.10
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Locus conservation? | ||||
---|---|---|---|---|
HOXB-AS3:21 | no | no | no | no |
Available literature
- Ragusa (2015), Non-coding landscapes of colorectal cancer., World J. Gastroenterol.
- Yang (2015), Expression profile of long non-coding RNAs is altered in endometrial cancer., Int J Clin Exp Med
- Han (2014), Screening of lymph nodes metastasis associated lncRNAs in colorectal cancer patients., World J. Gastroenterol.
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
3.1 | lnc-CALCOCO2-8:6 |
4.0 | lnc-CALCOCO2-8:6 |
4.1 | lnc-CALCOCO2-8:6 |
5.0 | lnc-CALCOCO2-8:6 |
5.1 | HOXB-AS3:2 |
5.2 | HOXB-AS3:21 |