Transcript: HPN-AS1:1

Basic information

LNCipedia transcript ID: HPN-AS1:1 
HGNC Gene Symbol: HPN-AS1    
HGNC Full Gene Name: HPN antisense RNA 1
Ensembl Gene ID: ENSG00000227392
Ensembl Transcript ID: ENST00000392227
RefSeq ID: NR_024562
Location (hg38): chr19:35059059-35106304
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1124 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT065795; NR_024562; ENST00000392227.2; NR_024562.1
Alternative gene names: ENSG00000227392.1; HPN-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -40.79 non-coding 
CPAT coding probability 85.66% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
HPN-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC020907.3-1:1
4.0 HPN-AS1:1
4.1 HPN-AS1:1
5.0 HPN-AS1:1
5.1 HPN-AS1:1
5.2 HPN-AS1:1