Transcript: IBA57-DT:6

Basic information

LNCipedia transcript ID: IBA57-DT:6 
LNCipedia gene ID: IBA57-DT
RefSeq ID: NR_103539
Location (hg38): chr1:228164086-228164848
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 602 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT009994; NR_103539; NR_103539.1
Alternative gene names: FLJ32878; IBA57-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.5417 non-coding 
CPAT coding probability 19.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IBA57-DT:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf148-1:2
4.0 IBA57-AS1:2
4.1 IBA57-AS1:2
5.0 IBA57-AS1:2
5.1 IBA57-DT:3
5.2 IBA57-DT:6