Transcript: IDH1-AS1:6

Basic information

LNCipedia transcript ID: IDH1-AS1:6 
LNCipedia gene ID: IDH1-AS1
Location (hg38): chr2:208255229-208258051
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2823 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231908.1|ENCT00000235024.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.0997 non-coding 
CPAT coding probability 5.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IDH1-AS1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 IDH1-AS1:6
5.0 IDH1-AS1:6
5.1 IDH1-AS1:6
5.2 IDH1-AS1:6