Transcript: IDH2-DT:19

Basic information

LNCipedia transcript ID: IDH2-DT:19 
HGNC Gene Symbol: IDH2-DT    
HGNC Full Gene Name: IDH2 divergent transcript
Ensembl Gene ID: ENSG00000259685
Ensembl Transcript ID: ENST00000561101
Location (hg38): chr15:90102649-90133445
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 355 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000561101.2
Alternative gene names: ENSG00000259685.2; CTD-2315E11.1; AC092769.1; IDH2-DT


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -6.9985 non-coding 
CPAT coding probability 2.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IDH2-DT:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ZNF710-4:2
4.1 lnc-ZNF710-4:2
5.0 lnc-ZNF710-4:2
5.1 IDH2-DT:9
5.2 IDH2-DT:19