Transcript: IFNG-AS1:2
Basic information
LNCipedia transcript ID: IFNG-AS1:2
HGNC Gene Symbol: IFNG-AS1
HGNC Full Gene Name:
IFNG antisense RNA 1
Ensembl Gene ID:
ENSG00000255733
Ensembl Transcript ID:
ENST00000538665
RefSeq ID:
NR_104125
Location (hg38): chr12:67989445-68021327
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1791 bp
Exons: 4
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000538665; ENST00000538665.1; IFNG-AS1-001; OTTHUMT00000402294.1; NONHSAT029277; NR_104125; ENST00000538665.5; NR_104125.1
Alternative gene names: ENSG00000255733; GS1-410F4.2; ENSG00000255733.1; IFNG-AS1; OTTHUMG00000169108.1; ENSG00000255733.5; Tmevpg1; LincR-Ifng-3'AS; NEST
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Locus conservation? | ||||
---|---|---|---|---|
IFNG-AS1:2 | no | no | no | no |
Available literature
- Peng (2015), The Long Noncoding RNA IFNG-AS1 Promotes T Helper Type 1 Cells Response in Patients with Hashimoto's Thyroiditis., Sci Rep
- Spurlock (2015), Expression and functions of long noncoding RNAs during human T helper cell differentiation., Nat Commun
- Collier (2014), Regulation of the Th1 genomic locus from Ifng through Tmevpg1 by T-bet., J. Immunol.
- Hu (2013), Expression and regulation of intergenic long noncoding RNAs during T cell development and differentiation., Nat. Immunol.
- Vigneau (2001), Homology between a 173-kb region from mouse chromosome 10, telomeric to the Ifng locus, and human chromosome 12q15., Genomics
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
1.3 | lnc-DYRK2-4:1 |
3.1 | lnc-DYRK2-4:1 |
4.0 | IFNG-AS1:2 |
4.1 | IFNG-AS1:2 |
5.0 | IFNG-AS1:2 |
5.1 | IFNG-AS1:2 |
5.2 | IFNG-AS1:2 |