Transcript: IGF2BP2-AS1:2

Basic information

LNCipedia transcript ID: IGF2BP2-AS1:2 
HGNC Gene Symbol: IGF2BP2-AS1    
HGNC Full Gene Name: IGF2BP2 antisense RNA 1
Ensembl Gene ID: ENSG00000163915
Ensembl Transcript ID: ENST00000456447
RefSeq ID: NR_126326
Location (hg38): chr3:185713252-185729787
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1531 bp
Exons: 8
Sources: Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126326; ENST00000456447.5; NR_126326.1
Alternative gene names: ENSG00000163915.7; IGF2BP2-AS1; FLJ32900


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -72.8455 non-coding 
CPAT coding probability 14.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IGF2BP2-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C3orf65-5:3
4.0 IGF2BP2-AS1:2
4.1 IGF2BP2-AS1:2
5.0 IGF2BP2-AS1:2
5.1 IGF2BP2-AS1:2
5.2 IGF2BP2-AS1:2