Transcript: IL12A-AS1:4

Basic information

LNCipedia transcript ID: IL12A-AS1:4 
HGNC Gene Symbol: IL12A-AS1    
HGNC Full Gene Name: IL12A antisense RNA 1
Ensembl Gene ID: ENSG00000244040
Ensembl Transcript ID: ENST00000462431
Location (hg38): chr3:159998174-160015861
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 988 bp
Exons: 5
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000462431; ENST00000462431.1; CTD-2049J23.2-002; OTTHUMT00000352648.1; NONHSAT092971
Alternative gene names: ENSG00000244040; CTD-2049J23.2; ENSG00000244040.1; OTTHUMG00000158951.1; IL12A-AS1; ENSG00000244040.5; ; ENSG00000244040.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.0018 non-coding 
CPAT coding probability 2.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IL12A-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-432B6.3.1-1:3
3.1 lnc-RP11-432B6.3.1-1:3
4.0 IL12A-AS1:4
4.1 IL12A-AS1:4
5.0 IL12A-AS1:4
5.1 IL12A-AS1:4
5.2 IL12A-AS1:4