Transcript: IL21R-AS1:1

Basic information

LNCipedia transcript ID: IL21R-AS1:1 
LNCipedia gene ID: IL21R-AS1
Location (hg38): chr16:27447672-27453393
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2612 bp
Exons: 3
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000510561
Alternative gene names: ENSG00000250593;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.2335 non-coding 
CPAT coding probability 3.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IL21R-AS1:1 no no no no

Available literature

  1. Cai (2016), Circulating 'lncRNA OTTHUMT00000387022' from monocytes as a novel biomarker for coronary artery disease., Cardiovasc. Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GTF3C1-1:1
3.1 lnc-GTF3C1-1:2
4.0 IL21R-AS1:1
4.1 IL21R-AS1:1
5.0 IL21R-AS1:1
5.1 IL21R-AS1:1
5.2 IL21R-AS1:1