Transcript: INE2:1

Basic information

LNCipedia transcript ID: INE2:1 
HGNC Gene Symbol: INE2    
HGNC Full Gene Name: inactivation escape 2
Ensembl Gene ID: ENSG00000281371
Ensembl Transcript ID: ENST00000630399
RefSeq ID: NR_002725
Location (hg38): chrX:15785716-15787589
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1874 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT136363; NR_002725; ENST00000630399.1; NR_002725.2
Alternative gene names: ENSG00000281371.1; INE2; NCRNA00011


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.4651 non-coding 
CPAT coding probability 4.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
INE2:1 yes no no no

Available literature

  1. Esposito (1997), Escape from X inactivation of two new genes associated with DXS6974E and DXS7020E., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AP1S2-3:1
4.0 INE2:1
4.1 INE2:1
5.0 INE2:1
5.1 INE2:1
5.2 INE2:1