Transcript: INHBA-AS1:5

Basic information

LNCipedia transcript ID: INHBA-AS1:5 
HGNC Gene Symbol: INHBA-AS1    
HGNC Full Gene Name: INHBA antisense RNA 1
Ensembl Gene ID: ENSG00000224116
Ensembl Transcript ID: ENST00000420821
RefSeq ID: NR_027119
Location (hg38): chr7:41693948-41713194
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1858 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000420821.1; INHBA-AS1-003; OTTHUMT00000338453.1; NR_027119; NR_027119.1
Alternative gene names: ENSG00000224116.2; INHBA-AS1; OTTHUMG00000155114.2; ENSG00000224116.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.6778 non-coding 
CPAT coding probability 5.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
INHBA-AS1:5 no no no no

Available literature

  1. Ke (2017), The combination of circulating long noncoding RNAs AK001058, INHBA-AS1, MIR4435-2HG, and CEBPA-AS1 fragments in plasma serve as diagnostic markers for gastric cancer., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C7orf10-2:3
4.0 INHBA-AS1:5
4.1 INHBA-AS1:5
5.0 INHBA-AS1:5
5.1 INHBA-AS1:5
5.2 INHBA-AS1:5