Transcript: INKA2-AS1:15

Basic information

LNCipedia transcript ID: INKA2-AS1:15 
LNCipedia gene ID: INKA2-AS1
Location (hg38): chr1:111739542-111749938
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4415 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227811.2|HBMT00000025228.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -76.7822 non-coding 
CPAT coding probability 1.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
INKA2-AS1:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 FAM212B-AS1:5
5.0 FAM212B-AS1:5
5.1 INKA2-AS1:3
5.2 INKA2-AS1:15