Transcript: INKA2-AS1:22

Basic information

LNCipedia transcript ID: INKA2-AS1:22 
LNCipedia gene ID: INKA2-AS1
RefSeq ID: NR_038952
Location (hg38): chr1:111739841-111747798
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1976 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT005200; NR_038952; NR_038952.1
Alternative gene names: ; FAM212B-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -90.797 non-coding 
CPAT coding probability 3.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
INKA2-AS1:22 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DDX20-1:3
4.0 FAM212B-AS1:2
4.1 FAM212B-AS1:2
5.0 FAM212B-AS1:2
5.1 INKA2-AS1:10
5.2 INKA2-AS1:22