Transcript: INO80-AS1:3

Basic information

LNCipedia transcript ID: INO80-AS1:3 
HGNC Gene Symbol: INO80-AS1    
HGNC Full Gene Name: INO80 antisense RNA 1
Ensembl Gene ID: ENSG00000259521
Ensembl Transcript ID: ENST00000558967
Location (hg38): chr15:41016807-41024542
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 312 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000558967.1; RP11-540O11.4-002; OTTHUMT00000418923.1; NONHSAT041908
Alternative gene names: ENSG00000259521.1; RP11-540O11.4; OTTHUMG00000172515.2; INO80-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -123.2563 non-coding 
CPAT coding probability 3.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
INO80-AS1:3 yes no no no

Available literature

  1. Long (2016), Distinct expression profiles of lncRNAs between early-onset preeclampsia and preterm controls., Clin. Chim. Acta


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHAC1-4:1
4.0 lnc-CHAC1-4:1
4.1 lnc-CHAC1-4:1
5.0 lnc-CHAC1-4:1
5.1 INO80-AS1:2
5.2 INO80-AS1:3