Transcript: IPO9-AS1:7

Basic information

LNCipedia transcript ID: IPO9-AS1:7 
LNCipedia gene ID: IPO9-AS1
Location (hg38): chr1:201816854-201829528
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 767 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231871.1|ENST00000421449.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.5023 non-coding 
CPAT coding probability 5.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IPO9-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 IPO9-AS1:7
5.0 IPO9-AS1:7
5.1 IPO9-AS1:7
5.2 IPO9-AS1:7