Transcript: IQCH-AS1:6

Basic information

LNCipedia transcript ID: IQCH-AS1:6 
HGNC Gene Symbol: IQCH-AS1    
HGNC Full Gene Name: IQCH antisense RNA 1
Ensembl Gene ID: ENSG00000259673
Ensembl Transcript ID: ENST00000559298
Location (hg38): chr15:67403619-67521636
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5753 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000559298.1; RP11-502I4.1-003; OTTHUMT00000417487.1; NONHSAT046854; ENST00000559298.5
Alternative gene names: ENSG00000259673.1; RP11-502I4.1; OTTHUMG00000172247.1; IQCH-AS1; ENSG00000259673.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.3483 non-coding 
CPAT coding probability 1.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IQCH-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AAGAB-2:2
4.0 IQCH-AS1:6
4.1 IQCH-AS1:6
5.0 IQCH-AS1:6
5.1 IQCH-AS1:6
5.2 IQCH-AS1:6