Transcript: IQCJ-SCHIP1-AS1:1

Basic information

LNCipedia transcript ID: IQCJ-SCHIP1-AS1:1 
LNCipedia gene ID: IQCJ-SCHIP1-AS1
Location (hg38): chr3:159731650-159768938
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 925 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT092962
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -188.9432 non-coding 
CPAT coding probability 3.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IQCJ-SCHIP1-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-432B6.3.1-2:3
4.0 IQCJ-SCHIP1-AS1:1
4.1 IQCJ-SCHIP1-AS1:1
5.0 IQCJ-SCHIP1-AS1:1
5.1 IQCJ-SCHIP1-AS1:1
5.2 IQCJ-SCHIP1-AS1:1