Transcript: IQCJ-SCHIP1-AS1:12

Basic information

LNCipedia transcript ID: IQCJ-SCHIP1-AS1:12 
LNCipedia gene ID: IQCJ-SCHIP1-AS1
Location (hg38): chr3:159762804-159763233
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 430 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000241211.1|HBMT00001014415.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -753.8661 non-coding 
CPAT coding probability 2.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IQCJ-SCHIP1-AS1:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 IQCJ-SCHIP1-AS1:12
5.0 IQCJ-SCHIP1-AS1:12
5.1 IQCJ-SCHIP1-AS1:12
5.2 IQCJ-SCHIP1-AS1:12