Transcript: ITGB1-DT:44

Basic information

LNCipedia transcript ID: ITGB1-DT:44 
LNCipedia gene ID: ITGB1-DT
Location (hg38): chr10:32982551-33005661
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 625 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229656.2|ENCT00000044928.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 12.9022 non-coding 
CPAT coding probability 0.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ITGB1-DT:44 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C10orf68-1:21
5.0 lnc-C10orf68-1:21
5.1 ITGB1-DT:21
5.2 ITGB1-DT:44