Transcript: ITPKB-AS1:2

Basic information

LNCipedia transcript ID: ITPKB-AS1:2 
LNCipedia gene ID: ITPKB-AS1
Location (hg38): chr1:226653590-226701396
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 36841 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000037790.1|MICT00000031874.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 25.6008 non-coding 
CPAT coding probability 1.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ITPKB-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 ITPKB-AS1:2
5.0 ITPKB-AS1:2
5.1 ITPKB-AS1:2
5.2 ITPKB-AS1:2