Transcript: ITPKB-IT1:1

Basic information

LNCipedia transcript ID: ITPKB-IT1:1 
LNCipedia gene ID: ITPKB-IT1
RefSeq ID: NR_103784
Location (hg38): chr1:226656080-226675068
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1347 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT009899; NR_103784; NR_103784.1
Alternative gene names: ; ITPKB-IT1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -59.3461 non-coding 
CPAT coding probability 4.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ITPKB-IT1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PARP1-1:3
4.0 ITPKB-IT1:1
4.1 ITPKB-IT1:1
5.0 ITPKB-IT1:1
5.1 ITPKB-IT1:1
5.2 ITPKB-IT1:1