Transcript: ITPKB-IT1:2

Basic information

LNCipedia transcript ID: ITPKB-IT1:2 
HGNC Gene Symbol: ITPKB-IT1    
HGNC Full Gene Name: ITPKB intronic transcript 1
Ensembl Gene ID: ENSG00000228382
Ensembl Transcript ID: ENST00000412918
Location (hg38): chr1:226656680-226675067
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 746 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000412918.1; ITPKB-IT1-003; OTTHUMT00000091639.1
Alternative gene names: ENSG00000228382.1; ITPKB-IT1; OTTHUMG00000037587.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -201.7459 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ITPKB-IT1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PARP1-1:1
4.0 ITPKB-IT1:2
4.1 ITPKB-IT1:2
5.0 ITPKB-IT1:2
5.1 ITPKB-IT1:2
5.2 ITPKB-IT1:2