Transcript: JRKL-AS1:6

Basic information

LNCipedia transcript ID: JRKL-AS1:6 
LNCipedia gene ID: JRKL-AS1
RefSeq ID: NR_047481
Location (hg38): chr11:96443281-96506876
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 648 bp
Exons: 5
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_047481.1
Alternative gene names: JRKL-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.3145 non-coding 
CPAT coding probability 1.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
JRKL-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 JRKL-AS1:6
5.1 JRKL-AS1:6
5.2 JRKL-AS1:6