Transcript: KANSL1-AS1:1

Basic information

LNCipedia transcript ID: KANSL1-AS1:1 
LNCipedia gene ID: KANSL1-AS1
RefSeq ID: NR_034172
Location (hg38): chr17:46193573-46196723
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 522 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT054203; NR_034172; NR_034172.1
Alternative gene names: ; KANSL1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -228.7962 non-coding 
CPAT coding probability 8.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KANSL1-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC217773.1-1:4
4.0 KANSL1-AS1:1
4.1 KANSL1-AS1:1
5.0 KANSL1-AS1:1
5.1 KANSL1-AS1:1
5.2 KANSL1-AS1:1