Transcript: KANSL1-AS1:2

Basic information

LNCipedia transcript ID: KANSL1-AS1:2 
HGNC Gene Symbol: KANSL1-AS1    
HGNC Full Gene Name: KANSL1 antisense RNA 1
Ensembl Gene ID: ENSG00000214401
Ensembl Transcript ID: ENST00000398275
Location (hg38): chr17:46193576-46196721
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 517 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000398275.4; KANSL1-AS1-001; OTTHUMT00000440286.1
Alternative gene names: ENSG00000214401.4; KANSL1-AS1; OTTHUMG00000178028.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -228.7962 non-coding 
CPAT coding probability 8.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KANSL1-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC217773.1-1:1
4.0 KANSL1-AS1:2
4.1 KANSL1-AS1:2
5.0 KANSL1-AS1:2
5.1 KANSL1-AS1:2
5.2 KANSL1-AS1:2