Transcript: KANSL1-AS1:5

Basic information

LNCipedia transcript ID: KANSL1-AS1:5 
HGNC Gene Symbol: KANSL1-AS1    
HGNC Full Gene Name: KANSL1 antisense RNA 1
Ensembl Gene ID: ENSG00000214401
Ensembl Transcript ID: ENST00000572634
Location (hg38): chr17:46196058-46196723
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 666 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000572634.1; KANSL1-AS1-002; OTTHUMT00000440288.1; NONHSAT054205
Alternative gene names: ENSG00000214401.4; KANSL1-AS1; OTTHUMG00000178028.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.5547 non-coding 
CPAT coding probability 7.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KANSL1-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC217773.1-1:3
4.0 KANSL1-AS1:5
4.1 KANSL1-AS1:5
5.0 KANSL1-AS1:5
5.1 KANSL1-AS1:5
5.2 KANSL1-AS1:5