Transcript: KAZN-AS1:8

Basic information

LNCipedia transcript ID: KAZN-AS1:8 
LNCipedia gene ID: KAZN-AS1
Location (hg38): chr1:14390709-14419962
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 625 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001393; NONHSAT001008
Alternative gene names: XLOC_000711; linc-LRRC38-3

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.9064 non-coding 
CPAT coding probability 5.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KAZN-AS1:8 yes no no no

Available literature

  1. Liu (2016), Comprehensive transcriptome analysis identifies novel molecular subtypes and subtype-specific RNAs of triple-negative breast cancer., Breast Cancer Res.

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C1orf195-3:2
3.1 lnc-C1orf195-3:2
4.0 lnc-C1orf195-3:2
4.1 lnc-C1orf195-3:2
5.0 lnc-C1orf195-3:2
5.1 KAZN-AS1:3
5.2 KAZN-AS1:8