Transcript: KCND3-AS1:5

Basic information

LNCipedia transcript ID: KCND3-AS1:5 
HGNC Gene Symbol: KCND3-AS1    
HGNC Full Gene Name: KCND3 antisense RNA 1
Ensembl Gene ID: ENSG00000237556
Ensembl Transcript ID: ENST00000419258
Location (hg38): chr1:111909685-111910930
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 383 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000419258.1; KCND3-AS1-003; OTTHUMT00000033152.2; NONHSAT005214
Alternative gene names: ENSG00000237556.1; KCND3-AS1; OTTHUMG00000011993.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -368.541 non-coding 
CPAT coding probability 5.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KCND3-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DDX20-2:3
4.0 KCND3-AS1:5
4.1 KCND3-AS1:5
5.0 KCND3-AS1:5
5.1 KCND3-AS1:5
5.2 KCND3-AS1:5